BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012A07SP1|AL426303
(801 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig196 1307 0.0
>3x_Contig196
Length = 1254
Score = 1307 bits (659), Expect = 0.0
Identities = 660/661 (99%)
Strand = Plus / Minus
Query: 141 acagctggcacttaacgttctatcaaagtatgaaaaggaccactcctgatactgaaaaaa 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1254 acagctggcacttaacgttctatcaaagtatgaaaaggaccactcctgatactgaaaaaa 1195
Query: 201 tggcggtttcaacgtgtaggaaacaccttcttcttcaagttatgcgctgctaatttccga 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1194 tggcggtttcaacgtgtaggaaacaccttcttcttcaagttatgcgctgctaatttccga 1135
Query: 261 cccttccgtttcaaagatttcaggtatctctatcacagaatcactattgaattctaattg 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1134 cccttccgtttcaaagatttcaggtatctctatcacagaatcactattgaattctaattg 1075
Query: 321 gaaaaattgcctacagttgctatatcagaatgtatccaaacaataaaaggccacagagaa 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1074 gaaaaattgcctacagttgctatatcagaatgtatccaaacaataaaaggccacagagaa 1015
Query: 381 aatgtcaagctattcgacagttctcacaagataatggcactaggcctatttgttttctta 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 aatgtcaagctattcgacagttctcacaagataatggcactaggcctatttgttttctta 955
Query: 441 actttgcttaatttgggaaacaaagccagcacagagattgagtatccactgaaacgccct 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 actttgcttaatttgggaaacaaagccagcacagagattgagtatccactgaaacgccct 895
Query: 501 caaaaaagtccacaaacgaacgacaaacaagtatcagaccgattttagtttcccacagtt 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 caaaaaagtccacaaacgaacgacaaacaagtatcagaccgattttagtttcccacagtt 835
Query: 561 actaattgtcggcaatacctcccaaggatgcttttcggactctggaaataatgatgtgct 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 actaattgtcggcaatacctcccaaggatgcttttcggactctggaaataatgatgtgct 775
Query: 621 ctagattacttcatgaattttattaacttttcattcaaaaattgtaacatctgaaaaatc 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ctagattacttcatgaattttattaacttttcattcaaaaattgtaacatctgaaaaatc 715
Query: 681 gaaaaatgctcgamactgaaaaaaagtgttaatggtgcaaaggtgtctgtgtctatgttt 740
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 gaaaaatgctcgaaactgaaaaaaagtgttaatggtgcaaaggtgtctgtgtctatgttt 655
Query: 741 gactaaaggaactttaagagaaatcgcttctatgctttattatacgacccatgcgatgag 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 gactaaaggaactttaagagaaatcgcttctatgctttattatacgacccatgcgatgag 595
Query: 801 a 801
|
Sbjct: 594 a 594
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6669
Number of Sequences: 1807
Number of extensions: 6669
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 801
length of database: 10,358,551
effective HSP length: 16
effective length of query: 785
effective length of database: 10,329,639
effective search space: 8108766615
effective search space used: 8108766615
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)